Galaxy Unix-Tools

Unix Tools wrappers for Galaxy


Using this package, you can run common unix command line tools from within a Galaxy server.

Available Tools

Simple Text Processing (complementing Galaxy's text manipulation tools):

Advance Text Processing Tools:

note: Galaxy already have some tools that perform similar operations (especially grep,cut,join, and uniq). The tools in this package provide extended options, and resemble more closely to the unix command line versions.


28-Mar-2009 - Version 0.1

Initial public release.

23-May-2009 - Version 0.2

Combined "find and replace" tools into one, with more options (regex or simple string search).
Added "Select lines by word list" tool.

09-May-2012 - version 0.3

Long due, with many bug fixed and some new programs.